Resources

Jembi Health Systems (Jembi) and its staff/project often generate a range of resources from papers to poster to videos. These are listed here.

Journal Articles

Deshendran Moodley, Anban Pillay, and Christopher J. Seebregts. Position paper: Researching and developing open architectures for national health information systems in developing african countries. In International Symposium on Foundations of Health Information Engineering and Systems, August 2011.

Kuan-Hsiang G. Huang, Dominique Goedhals, Jonathan M. Carlson, Mark A. Brockman, Swati Mishra, Zabrina L. Brumme, Stephen Hickling, Christopher S. W. Tang, Toshiyuki Miura, Chris Seebregts, David Heckerman, Thumbi Ndung’u, Bruce Walker, Paul Klenerman, Dewald Steyn, Philip Goulder, Rodney Phillips, Cloete van Vuuren, John Frater, and Bloemfontein-Oxford Collaborative Group. Progression to AIDS in south africa is associated with both reverting and compensatory viral mutations. PLoS ONE, 6(4):e19018+, April 2011.

Edana Cassol, Theresa Rossouw, Chris Seebregts, and Sharon Cassol. Microbial translocation: A marker of advanced HIV-1 infection and a predictor of treatment failure? Journal of Infectious Diseases, 203(5):747–748, March 2011.

Tulio de Oliveira, Robert W. Shafer, and Christopher Seebregts. Public database for HIV drug resistance in southern africa. Nature, 464(7289):673, March 2010.

C. J. Seebregts, B. W. Mamlin, P. G. Biondich, H. S. F. Fraser, B. A. Wolfe, D. Jazayeri, J. Miranda, J. Blaya, C. Sinha, C. T. Bailey, and A. S. Kanter. Human factors for capacity building. lessons learned from the OpenMRS implementers network. IMIA Yearbook, pages 13–20, 2010.

Jørn Braa, Andrew S. Kanter, Neal Lesh, Ryan Crichton, Bob Jolliffe, Johan Sæbø, Edem Kossi, and Christopher J. Seebregts. Comprehensive yet scalable health information systems for low resource settings: a collaborative effort in sierra leone. AMIA … Annual Symposium proceedings / AMIA Symposium. AMIA Symposium, 2010:372–376, 2010.

Edana Cassol, Susan Malfeld, Phetole Mahasha, Schalk van der Merwe, Sharon Cassol, Chris Seebregts, Massimo Alfano, Guido Poli, and Theresa Rossouw. Persistent microbial translocation and immune activation in HIV-1-Infected south africans receiving combination antiretroviral therapy. Journal of Infectious Diseases, 202(5):723–733, September 2010.

Christopher J. Seebregts, Burke W. Mamlin, Paul G. Biondich, Hamish S. F. Fraser, Benjamin A. Wolfe, Darius Jazayeri, Christian Allen, Justin Miranda, Elaine Baker, Nicholas Musinguzi, Daniel Kayiwa, Carl Fourie, Neal Lesh, Andrew Kanter, Constantin T. Yiannoutsos, and Christopher Bailey. The OpenMRS implementers network. International Journal of Medical Informatics, 78(11):711–720, November 2009.

Christopher J. Seebregts, Merrick Zwarenstein, Catherine Mathews, Lara Fairall, Alan J. Flisher, Clive Seebregts, Wanjiru Mukoma, and Knut-Inge Klepp. Handheld computers for survey and trial data collection in resource-poor settings: Development and evaluation of PDACT, a palmâ„¢ pilot interviewing system. International Journal of Medical Informatics, 78(11):721–731, November 2009.

Maurice Mars and Christopher J. Seebregts. Country case study for e-HealthSouth africa. 2008.

Christopher J. Seebregts. Biomedical informatics. African Institute of Biotechnology Science and Technology, 16:4–5, 2006.

Lara R. Fairall, Max O. Bachmann, Goedele M. C. Louwagie, Cloete van Vuuren, Perpetual Chikobvu, Dewald Steyn, Gillian H. Staniland, Venessa Timmerman, Mpumelelo Msimanga, Chris J. Seebregts, Andrew Boulle, Ralph Nhiwatiwa, Eric D. Bateman, Merrick F. Zwarenstein, and Ronald D. Chapman. Effectiveness of antiretroviral treatment in a south african program: A cohort study. Arch Intern Med, 168(1):86–93, January 2008.

Christian Allen, Darius Jazayeri, Justin Miranda, Paul G. Biondich, Burke W. Mamlin, Ben A. Wolfe, Chris Seebregts, Neal Lesh, William M. Tierney, and Hamish S. Fraser. Experience in implementing the OpenMRS medical record system to support HIV treatment in rwanda. Studies in health technology and informatics, 129(Pt 1):382–386, 2007.

H. Jaspan, A. Flisher, L. Myer, C. Mathews, C. Seebregts, J. Berwick, R. Wood, and L. Bekker. Brief report: Methods for collecting sexual behaviour information from south african adolescentsâ”a comparison of paper versus personal digital assistant questionnaires. Journal of Adolescence, 30(2):353–359, April 2007.

Tulio de Oliveira, Koen Deforche, Sharon Cassol, Mika Salminen, Dimitris Paraskevis, Chris Seebregts, Joe Snoeck, Estrelita J. van Rensburg, Annemarie M. J. Wensing, David A. van de Vijver, Charles A. Boucher, Ricardo Camacho, and Anne-Mieke Vandamme. An automated genotyping system for analysis of HIV-1 and other microbial sequences. Bioinformatics, 21(19):3797–3800, October 2005.

Ryan Doherty, Tulio De Oliveira, Chris Seebregts, Sivapragashini Danaviah, Michelle Gordon, and Sharon Cassol. BioAfrica’s HIV-1 proteomics resource: Combining protein data with bioinformatics tools. Retrovirology, 2(1):18+, 2005.